Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

Here are the changes:

• Support binary data: Python bytes are now mapped to XML base64Binary.

• Bugfixes:

  • Fix OPTIONAL blocks in SPARQL queries that share variable outside the OPTIONAL block

  • Fix prop1[prop2 in OPTIONAL blocks in SPARQL queries

  • Fix individuals belonging to several classes when one of these classes has a OneOf construct including that individual

  • Fix descendants when using subclasses of ThingClass (as PyMedTermino2 does)

  • Fix and update pymedtermino2

  • Fix SPARQL queries with BIND and UNION

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2

Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

Here are the changes:

• Remove warning when Cython module is not available

• Update import OMOP CDM for their new CSV format

• Basic support for enumerated datatypes (= defined with an equivalent_to and a OneOf)

• Improved synchronization and multiprocessor support

• Bugfixes: * Fix IRI() return type in SPARQL * Fix SPARQL queries with two UNIONs when there is no shared variables between the unions members * Fix parsing ontology with IRI ending by '?' * Avoid reusing ID of destroyed entity (storid; reuse is problematic when sharing the quadstore with other processes)

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2

Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

Here are the changes:

• The PREDEFINED_ONTOLOGIES global dictionary can now be used to map ontology IRI to arbitrary local pathes or URL.

• The new FTSSqlite3Phrase() string type can be used to perform FTS search using Sqlite3 special syntax, e.g. default_world.search(label = FTSSqlite3Phrase("Electrocardiographic OR ECG"))

• Add support for RDF plain literals, via the plainliteral Python datatype.

• Bugfixes: * Fix set_name() on property when python_name is the same as name * Fix some special characters (e.g. :) and keyword (e.g. OR) in FTS search * Fix literal with no datatype (should be considered as string, see https://www.w3.org/TR/rdf11-concepts/#section-Graph-Literal * Fix wrong inheritance of TransitiveProperty, ReflexiveProperty and SymmetricProperty * Fix 'DeprecationWarning: invalid escape sequence' in regexp * Raise an error when creating a new ontology inside a with ontology:... block * Use rdf:langString for locstr (was rdf:plainLiteral)

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2

Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

This version includes an observation framework allowing to register a listener to any entity, in order to be notified when the entity relations are modified.

It also introduces a new syntax for annotating relations: AnnotatedRelation(s,p,o).comment = ["abc"] (NB the old syntax remains supported).

Here are the changes:

• New syntax for annotations on relation, e.g. AnnotatedRelation(s,p,o).comment = "abc" (the old syntax remains supported)

• Optimize annotations on relations

• Support GRAPH clauses in SPARQL INSERT queries

• Observation framework (see owlready2.observe and doc on the observation framework)

• Bugfixes: - Fix the update of equivalent_to after destroying a class - Fix the update of annotations on class when modified with SPARQL queries - Fix SPARQL GRAPH clause in SELECT queries when querying the graph as a variable and all triples are not inside the GRAPH clause - Fix LANGMATCHES SPARQL function - Prevent multiprocessing loading of large ontologies when fork is not available (i.e. on Mac) - Fix subproperties parent classes when destroying a property - Fix loading of TransitiveProperty, SymmetricProperty, AsymmetricProperty, ReflexiveProperty, IrreflexiveProperty

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2

Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

This version includes a backward incompatible change: literal with different languages are now considered as different. For instance:

• locstr("Test", "en") != "Test"

• locstr("Test", "en") != locstr("Test", "fr")

This was not the case in previous releases, and it caused some weird bugs and confusion between literals.

I also would like to introduce a new projet: FullPy is Python module for designing web applications entirely in Python. It uses Owlready for data semantics and persistance. More information on FullPy can be found here:

• https://fullpy.readthedocs.io/en/latest/

Finally, due to a last minute bug, there is no 0.42 version.

Here are the changes:

• INCOMPATIBLE CHANGE: Consider literal with different language as different

• Support GRAPH clauses in SPARQL queries

• World now supports custom lock (e.g. World(lock = ...))

• Bugfixes: - Fix World(enable_thread_parallelism = True) (was named enable_gevent) - Fix blank nodes in rdflib_store - Fix FILTER in SPARQL when the filter was just after a recursive query - Fix recursive query in SPARQL involving variables in their right part - Fix SPARQL query with annotations containing entities - Fix property creation when using a Union in the '>>' syntax (e.g. class Prop((MyClass | MyOtherClass) >> str): pass) - Fix UMLS extraction in PyMedTermino2 - Fix Class IRI with brackets (or other special characters) when writing RDF/XML file

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2

Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

This version introduces some works on thread-based parallelization. The parsing of huge OWL file is now faster (about 25% faster on GO), and Owlready can execute SPARQL queries in parallel. Please refer to the doc for more info (https://owlready2.readthedocs.io/en/latest/sync.html).

Here are the changes:

• Parallelized huge OWL file parsing (about 25% faster on GO)

• Parallelized SPARQL queries (see owlready2.sparql.execute_many() and execute(spawn = True))

• Bugfixes: - Fix Class.INDIRECT_get_class_properties() with restriction on Inverse(Prop) - Fix Restriction of type HasSelf - Fix delattr in destroy_entity() - Fix blank nodes importation from RDFlib - Fix ', + and - in FTS search

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2

Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

Here are the changes:

• General class axiom support

• Update Log4J in Pellet for security purpose

• Add get_lang_first() for annotations.

• Bugfixes: - Add trailing / to ontology URL if missing - Fix Individual.is_a when loading ontologies with individuals belonging to two classes, one being the descendant of the other - Fix datetime to make them XSD-compatible (thanks Lukas Müller) - Ensure that Things are properly initialized so that the __init__ method can be safely overwritten (thanks Lukas Müller) - Fix destroy_entity()

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2

Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

Here are the changes:

• Make RDF triple deletion non-ontology-specific

• Faster creation of individual with property value (e.g. MyClass(prop = [value]))

• Bugfixes: - Fix entity.prop.remove(x) and entity.prop = x when existing values are defined in another ontology than the entity - Fix inverse property update when referenced entity is destroyed (thanks Franzlst) - Prevent reasoners from reparenting OWL base entities such as Thing - Fix the reloading of an ontology that has been destroyed, when a local filename is provided as the ontology base IRI - Fix destroying object property involved in a property chain - Fix reloading of ontologies when the IRI of the ontology was a local filename - Fix SELECT * in SPARQL coumpound queries - Fix Class.get_class_properties() when some properties are defined as restriction on an Inverse property - Fix for RDFlib 0.6.2 (supports bind() override optional argument)

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2

Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

Here are the changes:

• Accepts localized language codes, such as fr_FR or fr_BE, and wildcard fr_any

• Add 'update_is_a' optional args to Ontology.destroy()

• Bugfixes: - Fix individual.INVERSE_prop update when prop is functional - Fix performance regression on complex SPARQL queries with OPTIONAL - Fix declare_datatype after a World has been closed - Fix Pellet reasoning on blank nodes (ignoring them) - Fix Pellet reasoning on strings data property that include comma "," - Fix boolean constant 'true' and 'false' in SPARQL engine - Fix INSERT SPARQL queries with UNION that insert RDF triples without variables - Fix SPARQL queries with only a FILTER NOT EXISTS in the WHERE part - Accept empty lines at the beginning of NTriple files - Support non-ASCII characters when parsing SWRL rules

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2

Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

Here are the changes:

• Add World.forget_reference(entity)

• Add NamedIndividual (for SPARQL results on rdf:type)

• Add 'update_relation' optional args to Ontology.destroy()

• Add Ontology.set_base_iri() and Ontology.base_iri = "new_base_iri"

• Bugfixes: - Fix SPARQL queries having a UNION but using no variable from the UNION - Fix SPARQL queries on read only quadstores - Fix SPARQL queries mixing OPTIONAL and VALUES / STATIC - Fix property defined as a subproperty of TransitiveProperty (and the like), but not of type ObjectProperty - Fix importlib.reload(owlready2) - Fix RDF/XML serialization of individuals whose class name start by a digit - Fix RDF/XML serialization when ontology base IRI ends with / - Fix Or.Classes = ... and And.Classes = ... - Fix ONLY class properties with more than two values

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2

Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

Here are the changes:

• Support xsd:duration, including DATETIME_DIFF(), DATETIME_ADD(), DATETIME_SUB() SPARQL non-standard functions

• Faster ontology operation (e.g. ontology deletion) on big quadstores

• Automatically add .owl, .rdf or .xml to ontology IRI if the IRI itself does not yield an OWL file

• Bugfixes: - Fix FusionClasses (= individuals belonging to several classes, i.e. multiple instanciation) when using several worlds - Fix OPTIONAL SPARQL clause when guessing variable types - Fix typo in undo entity destruction (thanks Lukas Westhofen) - Fix IRI from OWL namespace in SWRL rules - Fix Pellet explanation on inconsistent ontology - Fix MEDDRA parent-child relation of LLT in PyMedTermino2 - Make sure the filename is a file before returning (Thanks Nicolas Rouquette)

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2

Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

Here are the changes:

• SPARQL optimizations

• Support for VALUES in SPARQL

• Add STATIC optimization keyword extension to SPARQL

• Accept GROUP BY, HAVING, LIMIT in INSERT and DELETE SPARQL query

• Add the STORID(iri), DATE(), TIME() and DATETIME() SPARQL function

• UMLS CUI are now hierarchized by Semnatic Types (TUI)

• Improved parallelism

• Bugfixes: - Fix 'sqlite3.OperationalError: circular reference: prelim1_objs' in .instances(), caused by a bug in old versions of SQLite3 - Fix SPARQL INSERT query with data parameters in the INSERT clause - Fix RDF list parsing when the list includes the integer number 5 - Fix nb_parameter in SPARQL query when numbered parameters are used - Fix ObjectProperty.subclasses(), ObjectProperty.descendants(), Property.subclasses(), DataProperty.descendants(), AnnotationProperty.subclasses(), AnnotationProperty.descendants() - Fix declare_datatype() for datatype already used in Owlready, such as AnyURI - Fix Pellet on properties having annotations that are not declared in the loaded ontologies

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2

Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

Here are the changes:

• NEW FORUM ADDRESS: http://owlready.306.s1.nabble.com

• Support SPARQL property path expressions with parentheses without sequences, repeats or negative property set nested inside repeats

• Add define_datatype_in_ontology() global function for defining a new user-defined datatype in an ontology

• Class.instances() now takes into account equivalent classes (like other class methods such as .descendants())

• Add the LOADED(iri) SPARQL function

• Support Thing.is_a.append(...)

• Faster loading of very large quadstores

• list(onto.metadata) now lists the annotations present on the ontology

• Add OntologyClass and NamespaceClass argument to get_ontology() and get_namespace(), allowing the use of custom classes

• Bugfixes: - Accept UTF8 and latin encoding from reasoners (thanks Francesco Compagno) - Fix SPARQL query with a UNION without variables - Fix semantic type support in UMLS

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2

Owlready is a Python module for ontology-oriented programming. It can load OWL 2.0 ontologies and manipulate them transparently in Python.

Here are the changes:

• Bugfixes: - Fix 'sqlite3.OperationalError: no such table: sqlite_schema' with SQLite3 < 0.33

The new version be downloaded from PyPI (Python Package Index): https://pypi.python.org/pypi/Owlready2